UKBB Ulcerative colitis (ICD 10 code K51)

Source: R/data.R

Dataset retrieved from the UK biobank including of 5,452 UC cases (K51) and 481,862 controls. The dataset has been filtered on variants with P <1e-03.

UC_UKBB

Format

A data frame with 57,383 rows and 10 variables

CHROM

Chromosome, written as for example chr1 or 1

POS

genetic position of the variant

ID

Variant identifier, e.g. rsid

REF

Reference allele

ALT

Alternative allele

SE

Standard Error

P

P-value from Plink run, additive model, reggresion model GLM_FIRTH

OR

Odds Ratio

Max_Impact

Max variant impact (HIGH,MODERATE,LOW or LOWEST)

cohort_AF

variant allele frequency in the UKBB cohort)

Source

UC_K51_UKBB_p1e-03_5452_cases_481862_ctrls